Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 AC068472.1-201ENST00000474589 881 ntBASIC13.1□□□□□ -0.31
ODF3Q96PU9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ODF3Q96PU9 AL121761.2-201ENST00000598007 1648 ntBASIC13.1□□□□□ -0.31
ODF3Q96PU9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.1□□□□□ -0.31
ODF3Q96PU9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 AK4P3-201ENST00000418260 669 ntBASIC13.09□□□□□ -0.31
ODF3Q96PU9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 LINC01311-201ENST00000565162 1445 ntBASIC13.09□□□□□ -0.31
ODF3Q96PU9 LINC01238-205ENST00000567549 1107 ntBASIC13.09□□□□□ -0.31
ODF3Q96PU9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 AC005332.3-201ENST00000589904 676 ntBASIC13.09□□□□□ -0.31
ODF3Q96PU9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 LINC01023-201ENST00000606054 436 ntBASIC13.09□□□□□ -0.31
ODF3Q96PU9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ODF3Q96PU9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.09□□□□□ -0.31
ODF3Q96PU9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ODF3Q96PU9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.08□□□□□ -0.31
ODF3Q96PU9 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.08□□□□□ -0.31
ODF3Q96PU9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms