Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.24■□□□□ 0.35
NCLNQ969V3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.24■□□□□ 0.35
NCLNQ969V3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCLNQ969V3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.24■□□□□ 0.35
NCLNQ969V3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLNQ969V3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLNQ969V3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCLNQ969V3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLNQ969V3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLNQ969V3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLNQ969V3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.24■□□□□ 0.35
NCLNQ969V3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.24■□□□□ 0.35
NCLNQ969V3 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.24■□□□□ 0.35
NCLNQ969V3 MIR3917-201ENST00000580971 93 ntBASIC17.24■□□□□ 0.35
NCLNQ969V3 AC010240.3-201ENST00000607688 395 ntBASIC17.24■□□□□ 0.35
NCLNQ969V3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.24■□□□□ 0.35
NCLNQ969V3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.24■□□□□ 0.35
NCLNQ969V3 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.24■□□□□ 0.35
NCLNQ969V3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.24■□□□□ 0.35
NCLNQ969V3 PHGDH-209ENST00000641074 1780 ntBASIC17.24■□□□□ 0.35
NCLNQ969V3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.24■□□□□ 0.35
NCLNQ969V3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NCLNQ969V3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NCLNQ969V3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLNQ969V3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLNQ969V3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLNQ969V3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.24■□□□□ 0.35
NCLNQ969V3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.24■□□□□ 0.35
NCLNQ969V3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLNQ969V3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLNQ969V3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.23■□□□□ 0.35
NCLNQ969V3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.23■□□□□ 0.35
NCLNQ969V3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 AL031133.1-201ENST00000406807 723 ntBASIC17.23■□□□□ 0.35
NCLNQ969V3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.23■□□□□ 0.35
NCLNQ969V3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NCLNQ969V3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.23■□□□□ 0.35
NCLNQ969V3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
NCLNQ969V3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NCLNQ969V3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NCLNQ969V3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NCLNQ969V3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLNQ969V3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.23■□□□□ 0.35
NCLNQ969V3 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.23■□□□□ 0.35
NCLNQ969V3 SIRPAP1-201ENST00000448467 1770 ntBASIC17.23■□□□□ 0.35
NCLNQ969V3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 KRT8P50-201ENST00000562022 1438 ntBASIC17.22■□□□□ 0.35
NCLNQ969V3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NCLNQ969V3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
NCLNQ969V3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.22■□□□□ 0.35
NCLNQ969V3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.22■□□□□ 0.35
NCLNQ969V3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.22■□□□□ 0.35
NCLNQ969V3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NCLNQ969V3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
NCLNQ969V3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.22■□□□□ 0.35
NCLNQ969V3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NCLNQ969V3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.22■□□□□ 0.35
NCLNQ969V3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.22■□□□□ 0.35
NCLNQ969V3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NCLNQ969V3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLNQ969V3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLNQ969V3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCLNQ969V3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NCLNQ969V3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.21■□□□□ 0.35
NCLNQ969V3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLNQ969V3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLNQ969V3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.21■□□□□ 0.35
NCLNQ969V3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NCLNQ969V3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLNQ969V3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms