Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 AL121912.1-201ENST00000603683 238 ntBASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 MINOS1P3-201ENST00000457048 203 ntBASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 BCL2-203ENST00000589955 5011 ntBASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC33Q8N5R6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 AC011840.4-201ENST00000578471 627 ntBASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC33Q8N5R6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 AKR1C7P-201ENST00000305623 895 ntBASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 AC004263.2-201ENST00000617183 678 ntBASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC33Q8N5R6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms