Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
HIST3H2BBQ8N257 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST3H2BBQ8N257 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST3H2BBQ8N257 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HIST3H2BBQ8N257 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.21□□□□□ -0.29
HIST3H2BBQ8N257 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST3H2BBQ8N257 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST3H2BBQ8N257 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
HIST3H2BBQ8N257 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.21□□□□□ -0.29
HIST3H2BBQ8N257 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HIST3H2BBQ8N257 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HIST3H2BBQ8N257 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.21□□□□□ -0.3
HIST3H2BBQ8N257 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.21□□□□□ -0.3
HIST3H2BBQ8N257 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST3H2BBQ8N257 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST3H2BBQ8N257 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST3H2BBQ8N257 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST3H2BBQ8N257 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HIST3H2BBQ8N257 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
HIST3H2BBQ8N257 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 NORAD-201ENST00000565493 5339 ntBASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 AC103834.1-201ENST00000520383 144 ntBASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST3H2BBQ8N257 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 TSPY26P-201ENST00000476365 1326 ntBASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 KRT8P32-201ENST00000512863 1461 ntBASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 KRT87P-202ENST00000534226 1464 ntBASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 SERBP1P1-201ENST00000396021 1160 ntBASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST3H2BBQ8N257 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST3H2BBQ8N257 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms