Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 MYCLP1-201ENST00000372451 1075 ntBASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 AL035633.1-201ENST00000406139 838 ntBASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 AC004461.1-201ENST00000412461 403 ntBASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 AL096865.1-201ENST00000606796 927 ntBASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNKSR3Q6P9H4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 HLA-J-203ENST00000494367 1087 ntBASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 AC093512.1-201ENST00000617969 520 ntBASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 REXO1L3P-201ENST00000622202 1288 ntBASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 AC009949.1-201ENST00000623048 1830 ntBASIC18.93■□□□□ 0.62
CNKSR3Q6P9H4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 BCRP1-201ENST00000444246 691 ntBASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 AC100803.2-201ENST00000562459 1963 ntBASIC18.92■□□□□ 0.62
CNKSR3Q6P9H4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR3Q6P9H4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms