Protein–RNA interactions for Protein: Q3ZCM7

TUBB8, Tubulin beta-8 chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB8Q3ZCM7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 FLJ38576-201ENST00000623820 2459 ntBASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TUBB8Q3ZCM7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 MMP23A-201ENST00000234610 1017 ntBASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 UNC93B2-201ENST00000285383 730 ntBASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 REXO1L10P-201ENST00000615707 1290 ntBASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 AL445675.2-201ENST00000620291 557 ntBASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TUBB8Q3ZCM7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 RBM17P1-201ENST00000453646 1190 ntBASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.31■□□□□ 0.52
TUBB8Q3ZCM7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 AC103702.1-201ENST00000548801 2630 ntBASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TUBB8Q3ZCM7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms