Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ERCC6LQ2NKX8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 AC023824.1-201ENST00000562945 2975 ntBASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 MIPEPP3-201ENST00000412105 444 ntBASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 TSPY6P-201ENST00000448518 926 ntBASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ERCC6LQ2NKX8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 SOX15-203ENST00000570788 1093 ntBASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 AC022188.1-201ENST00000620960 1664 ntBASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC6LQ2NKX8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC6LQ2NKX8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.77■□□□□ 0.6
ERCC6LQ2NKX8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC6LQ2NKX8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ERCC6LQ2NKX8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ERCC6LQ2NKX8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ERCC6LQ2NKX8 CYP2T1P-202ENST00000641596 2535 ntBASIC18.77■□□□□ 0.6
ERCC6LQ2NKX8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC6LQ2NKX8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ERCC6LQ2NKX8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ERCC6LQ2NKX8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms