Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC006504.4-201ENST00000592118 1568 ntBASIC21.16■□□□□ 0.98
PDS5AQ29RF7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 POLD2P1-201ENST00000511220 997 ntBASIC21.16■□□□□ 0.98
PDS5AQ29RF7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 AC140113.2-201ENST00000604370 208 ntBASIC21.16■□□□□ 0.98
PDS5AQ29RF7 AL353135.1-201ENST00000606729 504 ntBASIC21.16■□□□□ 0.98
PDS5AQ29RF7 LINC01451-201ENST00000623792 534 ntBASIC21.16■□□□□ 0.98
PDS5AQ29RF7 AL805961.1-202ENST00000641562 540 ntBASIC21.16■□□□□ 0.98
PDS5AQ29RF7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 PMS2P7-201ENST00000506558 1336 ntBASIC21.16■□□□□ 0.98
PDS5AQ29RF7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDS5AQ29RF7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 GPR89P-201ENST00000407924 1495 ntBASIC21.15■□□□□ 0.98
PDS5AQ29RF7 AC135050.7-201ENST00000624508 2218 ntBASIC21.15■□□□□ 0.98
PDS5AQ29RF7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 ACTG1P4-201ENST00000425123 1122 ntBASIC21.15■□□□□ 0.98
PDS5AQ29RF7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.15■□□□□ 0.98
PDS5AQ29RF7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDS5AQ29RF7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
PDS5AQ29RF7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.14■□□□□ 0.98
PDS5AQ29RF7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.14■□□□□ 0.98
PDS5AQ29RF7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.14■□□□□ 0.98
PDS5AQ29RF7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
PDS5AQ29RF7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
PDS5AQ29RF7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 MED15P5-201ENST00000423150 992 ntBASIC21.14■□□□□ 0.97
PDS5AQ29RF7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 TERC-201ENST00000602385 541 ntBASIC21.14■□□□□ 0.97
PDS5AQ29RF7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PDS5AQ29RF7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 AC108751.1-201ENST00000490852 363 ntBASIC21.13■□□□□ 0.97
PDS5AQ29RF7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 AC008667.4-201ENST00000607370 168 ntBASIC21.13■□□□□ 0.97
PDS5AQ29RF7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.13■□□□□ 0.97
PDS5AQ29RF7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms