Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CMC4P56277 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
CMC4P56277 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CMC4P56277 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CMC4P56277 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CMC4P56277 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CMC4P56277 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.22□□□□□ -0.29
CMC4P56277 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 AL390961.4-201ENST00000623958 2535 ntBASIC13.21□□□□□ -0.29
CMC4P56277 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CMC4P56277 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.21□□□□□ -0.29
CMC4P56277 AL020996.1-203ENST00000536896 2307 ntBASIC13.21□□□□□ -0.29
CMC4P56277 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CMC4P56277 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.21□□□□□ -0.29
CMC4P56277 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.21□□□□□ -0.29
CMC4P56277 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.21□□□□□ -0.29
CMC4P56277 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.21□□□□□ -0.29
CMC4P56277 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.21□□□□□ -0.29
CMC4P56277 AC096582.2-201ENST00000510860 516 ntBASIC13.21□□□□□ -0.29
CMC4P56277 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.21□□□□□ -0.29
CMC4P56277 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CMC4P56277 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.21□□□□□ -0.29
CMC4P56277 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.21□□□□□ -0.29
CMC4P56277 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.21□□□□□ -0.29
CMC4P56277 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
CMC4P56277 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.21□□□□□ -0.29
CMC4P56277 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CMC4P56277 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CMC4P56277 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
CMC4P56277 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
CMC4P56277 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CMC4P56277 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.21□□□□□ -0.3
CMC4P56277 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CMC4P56277 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CMC4P56277 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CMC4P56277 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.21□□□□□ -0.3
CMC4P56277 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 AP000997.3-201ENST00000623333 2250 ntBASIC13.2□□□□□ -0.3
CMC4P56277 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CMC4P56277 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CMC4P56277 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CMC4P56277 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.2□□□□□ -0.3
CMC4P56277 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CMC4P56277 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.2□□□□□ -0.3
CMC4P56277 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.2□□□□□ -0.3
CMC4P56277 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
CMC4P56277 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.2□□□□□ -0.3
CMC4P56277 AL845331.1-201ENST00000424978 1190 ntBASIC13.2□□□□□ -0.3
CMC4P56277 AC002558.1-201ENST00000488906 803 ntBASIC13.2□□□□□ -0.3
CMC4P56277 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.2□□□□□ -0.3
CMC4P56277 MIR5100-201ENST00000579544 119 ntBASIC13.2□□□□□ -0.3
CMC4P56277 AC005336.2-201ENST00000593183 939 ntBASIC13.2□□□□□ -0.3
CMC4P56277 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.2□□□□□ -0.3
CMC4P56277 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CMC4P56277 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.2□□□□□ -0.3
CMC4P56277 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.2□□□□□ -0.3
CMC4P56277 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.2□□□□□ -0.3
CMC4P56277 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.2□□□□□ -0.3
CMC4P56277 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.2□□□□□ -0.3
CMC4P56277 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CMC4P56277 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.2□□□□□ -0.3
CMC4P56277 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CMC4P56277 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
CMC4P56277 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
CMC4P56277 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.2□□□□□ -0.3
CMC4P56277 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CMC4P56277 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.2□□□□□ -0.3
CMC4P56277 KRT8P47-201ENST00000604727 1398 ntBASIC13.2□□□□□ -0.3
CMC4P56277 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms