Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CACNA2D1P54289 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CACNA2D1P54289 AC009949.1-201ENST00000623048 1830 ntBASIC18.79■□□□□ 0.6
CACNA2D1P54289 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNA2D1P54289 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNA2D1P54289 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA2D1P54289 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 NOC2LP2-201ENST00000407594 1944 ntBASIC18.78■□□□□ 0.6
CACNA2D1P54289 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 AC097374.2-201ENST00000618617 1306 ntBASIC18.78■□□□□ 0.6
CACNA2D1P54289 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA2D1P54289 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA2D1P54289 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA2D1P54289 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA2D1P54289 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA2D1P54289 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 SAPCD2P3-201ENST00000455031 850 ntBASIC18.78■□□□□ 0.6
CACNA2D1P54289 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA2D1P54289 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA2D1P54289 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 AC138028.4-201ENST00000564984 1845 ntBASIC18.78■□□□□ 0.6
CACNA2D1P54289 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA2D1P54289 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNA2D1P54289 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNA2D1P54289 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.77■□□□□ 0.6
CACNA2D1P54289 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.77■□□□□ 0.6
CACNA2D1P54289 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.77■□□□□ 0.6
CACNA2D1P54289 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CACNA2D1P54289 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 FAAHP1-202ENST00000446499 1238 ntBASIC18.77■□□□□ 0.6
CACNA2D1P54289 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.77■□□□□ 0.6
CACNA2D1P54289 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.77■□□□□ 0.6
CACNA2D1P54289 LINC01711-201ENST00000598340 967 ntBASIC18.77■□□□□ 0.6
CACNA2D1P54289 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.77■□□□□ 0.6
CACNA2D1P54289 TP73-AS1-207ENST00000624167 988 ntBASIC18.77■□□□□ 0.6
CACNA2D1P54289 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 FLJ13224-201ENST00000313737 1514 ntBASIC18.77■□□□□ 0.6
CACNA2D1P54289 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.77■□□□□ 0.6
CACNA2D1P54289 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CACNA2D1P54289 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CACNA2D1P54289 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNA2D1P54289 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.77■□□□□ 0.59
CACNA2D1P54289 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.77■□□□□ 0.59
CACNA2D1P54289 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.77■□□□□ 0.59
CACNA2D1P54289 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.77■□□□□ 0.59
CACNA2D1P54289 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.77■□□□□ 0.59
CACNA2D1P54289 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CACNA2D1P54289 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CACNA2D1P54289 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CACNA2D1P54289 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.77■□□□□ 0.59
CACNA2D1P54289 AIRN-201ENST00000601203 4374 ntBASIC18.77■□□□□ 0.59
CACNA2D1P54289 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
CACNA2D1P54289 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CACNA2D1P54289 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CACNA2D1P54289 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms