Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.21■□□□□ 0.83
COPB2P35606 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COPB2P35606 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.21■□□□□ 0.83
COPB2P35606 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
COPB2P35606 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COPB2P35606 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COPB2P35606 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPB2P35606 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COPB2P35606 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPB2P35606 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPB2P35606 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 AC020763.4-201ENST00000623414 4170 ntBASIC20.2■□□□□ 0.82
COPB2P35606 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.2■□□□□ 0.82
COPB2P35606 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
COPB2P35606 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.2■□□□□ 0.82
COPB2P35606 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
COPB2P35606 RPSAP43-201ENST00000402237 625 ntBASIC20.2■□□□□ 0.82
COPB2P35606 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.2■□□□□ 0.82
COPB2P35606 DDX43P3-201ENST00000441064 443 ntBASIC20.2■□□□□ 0.82
COPB2P35606 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
COPB2P35606 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.2■□□□□ 0.82
COPB2P35606 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.2■□□□□ 0.82
COPB2P35606 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.2■□□□□ 0.82
COPB2P35606 AL691403.2-201ENST00000618460 490 ntBASIC20.2■□□□□ 0.82
COPB2P35606 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COPB2P35606 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
COPB2P35606 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.2■□□□□ 0.82
COPB2P35606 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPB2P35606 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.2■□□□□ 0.82
COPB2P35606 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
COPB2P35606 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.19■□□□□ 0.82
COPB2P35606 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.19■□□□□ 0.82
COPB2P35606 BX276092.7-203ENST00000637198 1536 ntBASIC20.19■□□□□ 0.82
COPB2P35606 AC132938.5-201ENST00000624980 1813 ntBASIC20.19■□□□□ 0.82
COPB2P35606 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.19■□□□□ 0.82
COPB2P35606 AC007967.2-201ENST00000432613 625 ntBASIC20.19■□□□□ 0.82
COPB2P35606 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.19■□□□□ 0.82
COPB2P35606 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.19■□□□□ 0.82
COPB2P35606 AL139424.1-201ENST00000607572 797 ntBASIC20.19■□□□□ 0.82
COPB2P35606 AC064836.3-201ENST00000607928 673 ntBASIC20.19■□□□□ 0.82
COPB2P35606 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.19■□□□□ 0.82
COPB2P35606 AC079781.4-201ENST00000641908 219 ntBASIC20.19■□□□□ 0.82
COPB2P35606 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COPB2P35606 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
COPB2P35606 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COPB2P35606 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.19■□□□□ 0.82
COPB2P35606 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.19■□□□□ 0.82
COPB2P35606 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COPB2P35606 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COPB2P35606 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPB2P35606 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPB2P35606 SIRPAP1-201ENST00000448467 1770 ntBASIC20.18■□□□□ 0.82
COPB2P35606 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.18■□□□□ 0.82
COPB2P35606 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.18■□□□□ 0.82
COPB2P35606 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COPB2P35606 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.18■□□□□ 0.82
COPB2P35606 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
COPB2P35606 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COPB2P35606 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPB2P35606 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
COPB2P35606 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
COPB2P35606 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.18■□□□□ 0.82
COPB2P35606 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.18■□□□□ 0.82
COPB2P35606 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.18■□□□□ 0.82
COPB2P35606 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.18■□□□□ 0.82
COPB2P35606 AC010327.4-202ENST00000591484 748 ntBASIC20.18■□□□□ 0.82
COPB2P35606 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COPB2P35606 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COPB2P35606 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COPB2P35606 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COPB2P35606 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.18■□□□□ 0.82
COPB2P35606 AC004817.3-201ENST00000602957 2129 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms