Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN7P35236 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN7P35236 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN7P35236 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN7P35236 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN7P35236 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN7P35236 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PTPN7P35236 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN7P35236 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PTPN7P35236 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN7P35236 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN7P35236 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTPN7P35236 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.33■□□□□ 0.53
PTPN7P35236 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.33■□□□□ 0.53
PTPN7P35236 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PTPN7P35236 AC112907.2-201ENST00000448639 330 ntBASIC18.33■□□□□ 0.52
PTPN7P35236 AL359075.1-203ENST00000462729 1002 ntBASIC18.33■□□□□ 0.52
PTPN7P35236 AC002558.1-201ENST00000488906 803 ntBASIC18.33■□□□□ 0.52
PTPN7P35236 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPN7P35236 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PTPN7P35236 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
PTPN7P35236 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPN7P35236 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTPN7P35236 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN7P35236 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN7P35236 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN7P35236 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN7P35236 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PTPN7P35236 SPDYE13P-201ENST00000445314 798 ntBASIC18.32■□□□□ 0.52
PTPN7P35236 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN7P35236 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN7P35236 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.32■□□□□ 0.52
PTPN7P35236 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN7P35236 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.32■□□□□ 0.52
PTPN7P35236 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PTPN7P35236 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPN7P35236 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPN7P35236 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPN7P35236 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PTPN7P35236 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTPN7P35236 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN7P35236 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PTPN7P35236 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 AC009053.2-201ENST00000563701 2365 ntBASIC18.31■□□□□ 0.52
PTPN7P35236 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPN7P35236 AK4P3-201ENST00000418260 669 ntBASIC18.31■□□□□ 0.52
PTPN7P35236 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.31■□□□□ 0.52
PTPN7P35236 KRT18P57-201ENST00000443599 1254 ntBASIC18.31■□□□□ 0.52
PTPN7P35236 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN7P35236 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.31■□□□□ 0.52
PTPN7P35236 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPN7P35236 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.31■□□□□ 0.52
PTPN7P35236 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPN7P35236 RNF126P1-202ENST00000569893 925 ntBASIC18.31■□□□□ 0.52
PTPN7P35236 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.31■□□□□ 0.52
PTPN7P35236 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.31■□□□□ 0.52
PTPN7P35236 AL139327.4-201ENST00000612362 153 ntBASIC18.31■□□□□ 0.52
PTPN7P35236 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.31■□□□□ 0.52
PTPN7P35236 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
PTPN7P35236 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPN7P35236 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPN7P35236 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms