Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD48P09326 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD48P09326 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD48P09326 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.37■□□□□ 0.53
CD48P09326 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CD48P09326 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.36■□□□□ 0.53
CD48P09326 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.36■□□□□ 0.53
CD48P09326 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.36■□□□□ 0.53
CD48P09326 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.36■□□□□ 0.53
CD48P09326 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.36■□□□□ 0.53
CD48P09326 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.36■□□□□ 0.53
CD48P09326 GUSBP12-201ENST00000513727 720 ntBASIC18.36■□□□□ 0.53
CD48P09326 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.36■□□□□ 0.53
CD48P09326 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CD48P09326 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.36■□□□□ 0.53
CD48P09326 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.36■□□□□ 0.53
CD48P09326 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CD48P09326 HTR7P1-202ENST00000624664 4411 ntBASIC18.36■□□□□ 0.53
CD48P09326 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.36■□□□□ 0.53
CD48P09326 BX276092.7-203ENST00000637198 1536 ntBASIC18.36■□□□□ 0.53
CD48P09326 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CD48P09326 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.35■□□□□ 0.53
CD48P09326 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
CD48P09326 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.35■□□□□ 0.53
CD48P09326 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
CD48P09326 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 AC091607.1-201ENST00000490318 1060 ntBASIC18.35■□□□□ 0.53
CD48P09326 KRT8P26-201ENST00000534154 1276 ntBASIC18.35■□□□□ 0.53
CD48P09326 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.35■□□□□ 0.53
CD48P09326 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.35■□□□□ 0.53
CD48P09326 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.35■□□□□ 0.53
CD48P09326 AC005336.2-201ENST00000593183 939 ntBASIC18.35■□□□□ 0.53
CD48P09326 AL353801.3-201ENST00000609898 542 ntBASIC18.35■□□□□ 0.53
CD48P09326 IGHV3-41-201ENST00000613121 348 ntBASIC18.35■□□□□ 0.53
CD48P09326 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CD48P09326 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CD48P09326 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CD48P09326 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CD48P09326 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.35■□□□□ 0.53
CD48P09326 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD48P09326 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.34■□□□□ 0.53
CD48P09326 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CD48P09326 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CD48P09326 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CD48P09326 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.34■□□□□ 0.53
CD48P09326 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CD48P09326 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.34■□□□□ 0.53
CD48P09326 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CD48P09326 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CD48P09326 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.34■□□□□ 0.53
CD48P09326 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.34■□□□□ 0.53
CD48P09326 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.34■□□□□ 0.53
CD48P09326 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD48P09326 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CD48P09326 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.34■□□□□ 0.53
CD48P09326 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms