Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CYP3A4P08684 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CYP3A4P08684 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.89■□□□□ 0.77
CYP3A4P08684 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.89■□□□□ 0.77
CYP3A4P08684 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CYP3A4P08684 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CYP3A4P08684 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CYP3A4P08684 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CYP3A4P08684 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.89■□□□□ 0.77
CYP3A4P08684 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CYP3A4P08684 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CYP3A4P08684 KLF4P1-201ENST00000412782 1185 ntBASIC19.89■□□□□ 0.77
CYP3A4P08684 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CYP3A4P08684 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.89■□□□□ 0.77
CYP3A4P08684 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CYP3A4P08684 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.89■□□□□ 0.77
CYP3A4P08684 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.89■□□□□ 0.77
CYP3A4P08684 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.89■□□□□ 0.77
CYP3A4P08684 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.89■□□□□ 0.77
CYP3A4P08684 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CYP3A4P08684 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
CYP3A4P08684 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CYP3A4P08684 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.89■□□□□ 0.77
CYP3A4P08684 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CYP3A4P08684 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.89■□□□□ 0.77
CYP3A4P08684 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CYP3A4P08684 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CYP3A4P08684 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.89■□□□□ 0.77
CYP3A4P08684 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
CYP3A4P08684 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYP3A4P08684 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP3A4P08684 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CYP3A4P08684 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP3A4P08684 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.88■□□□□ 0.77
CYP3A4P08684 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP3A4P08684 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CYP3A4P08684 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP3A4P08684 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CYP3A4P08684 AC009336.1-201ENST00000608941 1553 ntBASIC19.88■□□□□ 0.77
CYP3A4P08684 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP3A4P08684 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYP3A4P08684 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.88■□□□□ 0.77
CYP3A4P08684 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYP3A4P08684 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYP3A4P08684 AF186996.4-201ENST00000467186 377 ntBASIC19.88■□□□□ 0.77
CYP3A4P08684 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYP3A4P08684 STK19B-204ENST00000512515 211 ntBASIC19.88■□□□□ 0.77
CYP3A4P08684 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP3A4P08684 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP3A4P08684 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP3A4P08684 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.88■□□□□ 0.77
CYP3A4P08684 AC025062.2-201ENST00000605477 670 ntBASIC19.88■□□□□ 0.77
CYP3A4P08684 AC148477.8-201ENST00000624298 468 ntBASIC19.88■□□□□ 0.77
CYP3A4P08684 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.88■□□□□ 0.77
CYP3A4P08684 AL022326.1-202ENST00000641533 845 ntBASIC19.88■□□□□ 0.77
CYP3A4P08684 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYP3A4P08684 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CYP3A4P08684 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYP3A4P08684 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CYP3A4P08684 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CYP3A4P08684 AC133963.1-201ENST00000504166 1679 ntBASIC19.87■□□□□ 0.77
CYP3A4P08684 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 AC148477.5-201ENST00000625164 1645 ntBASIC19.87■□□□□ 0.77
CYP3A4P08684 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CYP3A4P08684 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CYP3A4P08684 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CYP3A4P08684 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.87■□□□□ 0.77
CYP3A4P08684 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CYP3A4P08684 BX005266.1-201ENST00000473402 457 ntBASIC19.87■□□□□ 0.77
CYP3A4P08684 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.87■□□□□ 0.77
CYP3A4P08684 AC073648.2-201ENST00000510116 352 ntBASIC19.87■□□□□ 0.77
CYP3A4P08684 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.87■□□□□ 0.77
CYP3A4P08684 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 MTDHP4-201ENST00000600287 670 ntBASIC19.87■□□□□ 0.77
CYP3A4P08684 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.87■□□□□ 0.77
CYP3A4P08684 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CYP3A4P08684 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CYP3A4P08684 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.87■□□□□ 0.77
CYP3A4P08684 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.87■□□□□ 0.77
CYP3A4P08684 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CYP3A4P08684 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CYP3A4P08684 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CYP3A4P08684 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CYP3A4P08684 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CYP3A4P08684 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.87■□□□□ 0.77
CYP3A4P08684 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CYP3A4P08684 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CYP3A4P08684 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms