Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THBS1P07996 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THBS1P07996 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THBS1P07996 SPDYE13P-201ENST00000445314 798 ntBASIC16.33■□□□□ 0.2
THBS1P07996 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
THBS1P07996 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.33■□□□□ 0.2
THBS1P07996 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.33■□□□□ 0.2
THBS1P07996 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.33■□□□□ 0.2
THBS1P07996 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.33■□□□□ 0.2
THBS1P07996 AC083849.1-201ENST00000615227 514 ntBASIC16.33■□□□□ 0.2
THBS1P07996 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.33■□□□□ 0.2
THBS1P07996 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.33■□□□□ 0.2
THBS1P07996 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
THBS1P07996 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.33■□□□□ 0.2
THBS1P07996 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THBS1P07996 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THBS1P07996 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.33■□□□□ 0.2
THBS1P07996 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
THBS1P07996 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.33■□□□□ 0.2
THBS1P07996 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.33■□□□□ 0.2
THBS1P07996 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
THBS1P07996 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THBS1P07996 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
THBS1P07996 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
THBS1P07996 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.33■□□□□ 0.2
THBS1P07996 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.33■□□□□ 0.2
THBS1P07996 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
THBS1P07996 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
THBS1P07996 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.32■□□□□ 0.2
THBS1P07996 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.32■□□□□ 0.2
THBS1P07996 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.32■□□□□ 0.2
THBS1P07996 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
THBS1P07996 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.32■□□□□ 0.2
THBS1P07996 RNF126P1-202ENST00000569893 925 ntBASIC16.32■□□□□ 0.2
THBS1P07996 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.32■□□□□ 0.2
THBS1P07996 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.32■□□□□ 0.2
THBS1P07996 AC097374.2-201ENST00000618617 1306 ntBASIC16.32■□□□□ 0.2
THBS1P07996 AL358472.4-201ENST00000633140 710 ntBASIC16.32■□□□□ 0.2
THBS1P07996 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.32■□□□□ 0.2
THBS1P07996 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS1P07996 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
THBS1P07996 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
THBS1P07996 CROCCP2-202ENST00000412962 2773 ntBASIC16.32■□□□□ 0.2
THBS1P07996 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.31■□□□□ 0.2
THBS1P07996 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
THBS1P07996 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
THBS1P07996 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.31■□□□□ 0.2
THBS1P07996 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.31■□□□□ 0.2
THBS1P07996 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.31■□□□□ 0.2
THBS1P07996 AL671277.2-201ENST00000458060 996 ntBASIC16.31■□□□□ 0.2
THBS1P07996 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.31■□□□□ 0.2
THBS1P07996 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.31■□□□□ 0.2
THBS1P07996 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
THBS1P07996 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.31■□□□□ 0.2
THBS1P07996 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
THBS1P07996 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.31■□□□□ 0.2
THBS1P07996 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
THBS1P07996 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
THBS1P07996 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS1P07996 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.3■□□□□ 0.2
THBS1P07996 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS1P07996 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.3■□□□□ 0.2
THBS1P07996 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS1P07996 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS1P07996 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms