Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MT-ND1P03886 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND1P03886 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND1P03886 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND1P03886 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
MT-ND1P03886 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-ND1P03886 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.76■□□□□ 0.27
MT-ND1P03886 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
MT-ND1P03886 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MT-ND1P03886 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MT-ND1P03886 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-ND1P03886 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-ND1P03886 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND1P03886 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND1P03886 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND1P03886 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-ND1P03886 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND1P03886 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND1P03886 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-ND1P03886 AC105020.1-201ENST00000435356 2205 ntBASIC16.76■□□□□ 0.27
MT-ND1P03886 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MT-ND1P03886 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ND1P03886 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MT-ND1P03886 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
MT-ND1P03886 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 UNC93B2-201ENST00000285383 730 ntBASIC16.75■□□□□ 0.27
MT-ND1P03886 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.75■□□□□ 0.27
MT-ND1P03886 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
MT-ND1P03886 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.75■□□□□ 0.27
MT-ND1P03886 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.75■□□□□ 0.27
MT-ND1P03886 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.75■□□□□ 0.27
MT-ND1P03886 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ND1P03886 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MT-ND1P03886 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
MT-ND1P03886 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.75■□□□□ 0.27
MT-ND1P03886 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.75■□□□□ 0.27
MT-ND1P03886 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MT-ND1P03886 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MT-ND1P03886 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
MT-ND1P03886 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-ND1P03886 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.74■□□□□ 0.27
MT-ND1P03886 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.74■□□□□ 0.27
MT-ND1P03886 HOXB1-202ENST00000577092 1414 ntBASIC16.74■□□□□ 0.27
MT-ND1P03886 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-ND1P03886 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 MIR718-201ENST00000390190 70 ntBASIC16.74■□□□□ 0.27
MT-ND1P03886 SLC25A1P2-201ENST00000430693 912 ntBASIC16.74■□□□□ 0.27
MT-ND1P03886 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-ND1P03886 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MT-ND1P03886 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
MT-ND1P03886 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MT-ND1P03886 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.74■□□□□ 0.27
MT-ND1P03886 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND1P03886 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms