Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.87■□□□□ 0.77
GGPS1O95749 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.87■□□□□ 0.77
GGPS1O95749 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.87■□□□□ 0.77
GGPS1O95749 SPDYE21P-201ENST00000413323 827 ntBASIC19.87■□□□□ 0.77
GGPS1O95749 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.87■□□□□ 0.77
GGPS1O95749 LAGE3P1-201ENST00000425356 484 ntBASIC19.87■□□□□ 0.77
GGPS1O95749 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.87■□□□□ 0.77
GGPS1O95749 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.87■□□□□ 0.77
GGPS1O95749 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.87■□□□□ 0.77
GGPS1O95749 AC105339.3-201ENST00000560043 636 ntBASIC19.87■□□□□ 0.77
GGPS1O95749 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.87■□□□□ 0.77
GGPS1O95749 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
GGPS1O95749 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.87■□□□□ 0.77
GGPS1O95749 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GGPS1O95749 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
GGPS1O95749 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GGPS1O95749 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GGPS1O95749 AP002414.3-201ENST00000589352 1468 ntBASIC19.86■□□□□ 0.77
GGPS1O95749 SIGLEC16-201ENST00000599858 1437 ntBASIC19.86■□□□□ 0.77
GGPS1O95749 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.86■□□□□ 0.77
GGPS1O95749 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
GGPS1O95749 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.86■□□□□ 0.77
GGPS1O95749 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GGPS1O95749 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.86■□□□□ 0.77
GGPS1O95749 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
GGPS1O95749 AC145285.3-201ENST00000564603 959 ntBASIC19.86■□□□□ 0.77
GGPS1O95749 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.86■□□□□ 0.77
GGPS1O95749 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.86■□□□□ 0.77
GGPS1O95749 AC117500.6-201ENST00000624871 588 ntBASIC19.86■□□□□ 0.77
GGPS1O95749 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GGPS1O95749 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.86■□□□□ 0.77
GGPS1O95749 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.86■□□□□ 0.77
GGPS1O95749 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GGPS1O95749 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GGPS1O95749 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.86■□□□□ 0.77
GGPS1O95749 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
GGPS1O95749 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GGPS1O95749 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.85■□□□□ 0.77
GGPS1O95749 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.85■□□□□ 0.77
GGPS1O95749 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
GGPS1O95749 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.85■□□□□ 0.77
GGPS1O95749 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.85■□□□□ 0.77
GGPS1O95749 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.85■□□□□ 0.77
GGPS1O95749 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.85■□□□□ 0.77
GGPS1O95749 TERC-201ENST00000602385 541 ntBASIC19.85■□□□□ 0.77
GGPS1O95749 GPALPP1-207ENST00000611650 899 ntBASIC19.85■□□□□ 0.77
GGPS1O95749 AC006538.3-201ENST00000612495 578 ntBASIC19.85■□□□□ 0.77
GGPS1O95749 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.85■□□□□ 0.77
GGPS1O95749 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 AL049757.1-201ENST00000616842 1596 ntBASIC19.85■□□□□ 0.77
GGPS1O95749 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
GGPS1O95749 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 AC009949.1-201ENST00000623048 1830 ntBASIC19.85■□□□□ 0.77
GGPS1O95749 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
GGPS1O95749 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 AL353593.2-201ENST00000602529 1483 ntBASIC19.85■□□□□ 0.77
GGPS1O95749 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
GGPS1O95749 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.85■□□□□ 0.77
GGPS1O95749 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GGPS1O95749 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.84■□□□□ 0.77
GGPS1O95749 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
GGPS1O95749 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.84■□□□□ 0.77
GGPS1O95749 RNA5SP415-201ENST00000517246 115 ntBASIC19.84■□□□□ 0.77
GGPS1O95749 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.84■□□□□ 0.77
GGPS1O95749 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 AC116407.2-201ENST00000613639 860 ntBASIC19.84■□□□□ 0.77
GGPS1O95749 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.84■□□□□ 0.77
GGPS1O95749 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.84■□□□□ 0.77
GGPS1O95749 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GGPS1O95749 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms