Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 COX5A-206ENST00000568783 571 ntTSL 3 BASIC27.43■■□□□ 1.98
PCF11O94913 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PCF11O94913 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCF11O94913 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC27.43■■□□□ 1.98
PCF11O94913 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCF11O94913 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCF11O94913 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PCF11O94913 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC27.43■■□□□ 1.98
PCF11O94913 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
PCF11O94913 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCF11O94913 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC27.43■■□□□ 1.98
PCF11O94913 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC27.43■■□□□ 1.98
PCF11O94913 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
PCF11O94913 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCF11O94913 LINC00982-205ENST00000420957 435 ntBASIC27.43■■□□□ 1.98
PCF11O94913 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
PCF11O94913 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC27.43■■□□□ 1.98
PCF11O94913 AL078644.1-201ENST00000609881 752 ntBASIC27.43■■□□□ 1.98
PCF11O94913 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC27.42■■□□□ 1.98
PCF11O94913 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
PCF11O94913 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
PCF11O94913 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCF11O94913 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCF11O94913 SLC4A1APP2-201ENST00000424054 1259 ntBASIC27.42■■□□□ 1.98
PCF11O94913 PON3-203ENST00000427422 894 ntTSL 3 BASIC27.42■■□□□ 1.98
PCF11O94913 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC27.42■■□□□ 1.98
PCF11O94913 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC27.42■■□□□ 1.98
PCF11O94913 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC27.42■■□□□ 1.98
PCF11O94913 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCF11O94913 AC004790.2-201ENST00000623588 572 ntBASIC27.42■■□□□ 1.98
PCF11O94913 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCF11O94913 AC097637.2-201ENST00000624096 1997 ntBASIC27.42■■□□□ 1.98
PCF11O94913 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC27.41■■□□□ 1.98
PCF11O94913 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC27.41■■□□□ 1.98
PCF11O94913 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCF11O94913 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCF11O94913 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC27.41■■□□□ 1.98
PCF11O94913 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCF11O94913 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC27.41■■□□□ 1.98
PCF11O94913 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCF11O94913 PNMT-202ENST00000394246 821 ntTSL 2 BASIC27.41■■□□□ 1.98
PCF11O94913 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
PCF11O94913 CRYGEP-201ENST00000412192 528 ntBASIC27.41■■□□□ 1.98
PCF11O94913 AC211486.1-202ENST00000416371 468 ntBASIC27.41■■□□□ 1.98
PCF11O94913 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC27.41■■□□□ 1.98
PCF11O94913 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC27.41■■□□□ 1.98
PCF11O94913 AC211476.1-201ENST00000503899 468 ntBASIC27.41■■□□□ 1.98
PCF11O94913 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC27.41■■□□□ 1.98
PCF11O94913 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC27.41■■□□□ 1.98
PCF11O94913 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCF11O94913 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
PCF11O94913 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC27.41■■□□□ 1.98
PCF11O94913 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCF11O94913 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
PCF11O94913 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
PCF11O94913 AL590787.1-201ENST00000568856 1315 ntBASIC27.4■■□□□ 1.98
PCF11O94913 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PCF11O94913 LINC00304-203ENST00000565008 1864 ntBASIC27.4■■□□□ 1.98
PCF11O94913 MYCLP1-201ENST00000372451 1075 ntBASIC27.4■■□□□ 1.98
PCF11O94913 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC27.4■■□□□ 1.98
PCF11O94913 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
PCF11O94913 PDPK2P-202ENST00000562415 1191 ntBASIC27.4■■□□□ 1.98
PCF11O94913 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCF11O94913 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PCF11O94913 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCF11O94913 AC138028.4-201ENST00000564984 1845 ntBASIC27.4■■□□□ 1.98
PCF11O94913 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
PCF11O94913 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC27.4■■□□□ 1.98
PCF11O94913 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
PCF11O94913 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC27.4■■□□□ 1.98
PCF11O94913 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
PCF11O94913 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC27.4■■□□□ 1.98
PCF11O94913 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC27.39■■□□□ 1.98
PCF11O94913 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC27.39■■□□□ 1.98
PCF11O94913 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC27.39■■□□□ 1.98
PCF11O94913 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCF11O94913 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
PCF11O94913 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCF11O94913 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCF11O94913 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCF11O94913 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC27.39■■□□□ 1.98
PCF11O94913 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC27.39■■□□□ 1.98
PCF11O94913 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCF11O94913 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCF11O94913 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC27.39■■□□□ 1.97
PCF11O94913 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
PCF11O94913 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.97
PCF11O94913 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
PCF11O94913 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC27.39■■□□□ 1.97
PCF11O94913 MAL2-202ENST00000531508 892 ntTSL 3 BASIC27.39■■□□□ 1.97
PCF11O94913 PUDP-206ENST00000540122 825 ntTSL 2 BASIC27.39■■□□□ 1.97
PCF11O94913 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC27.39■■□□□ 1.97
PCF11O94913 AC104581.1-202ENST00000635932 2618 ntBASIC27.39■■□□□ 1.97
PCF11O94913 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC27.38■■□□□ 1.97
PCF11O94913 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCF11O94913 AMT-250ENST00000637682 1823 ntTSL 5 BASIC27.38■■□□□ 1.97
PCF11O94913 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCF11O94913 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCF11O94913 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PCF11O94913 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC27.38■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms