Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
PMPCBO75439 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.04■□□□□ 0.48
PMPCBO75439 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PMPCBO75439 AC016734.2-201ENST00000624325 1377 ntBASIC18.04■□□□□ 0.48
PMPCBO75439 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMPCBO75439 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PMPCBO75439 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.03■□□□□ 0.48
PMPCBO75439 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMPCBO75439 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PMPCBO75439 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMPCBO75439 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMPCBO75439 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.03■□□□□ 0.48
PMPCBO75439 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.03■□□□□ 0.48
PMPCBO75439 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMPCBO75439 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PMPCBO75439 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMPCBO75439 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.03■□□□□ 0.48
PMPCBO75439 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.03■□□□□ 0.48
PMPCBO75439 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMPCBO75439 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PMPCBO75439 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PMPCBO75439 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PMPCBO75439 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMPCBO75439 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.03■□□□□ 0.48
PMPCBO75439 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.03■□□□□ 0.48
PMPCBO75439 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMPCBO75439 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.03■□□□□ 0.48
PMPCBO75439 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.02■□□□□ 0.48
PMPCBO75439 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.02■□□□□ 0.48
PMPCBO75439 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.02■□□□□ 0.48
PMPCBO75439 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.02■□□□□ 0.48
PMPCBO75439 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PMPCBO75439 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 CHCHD2P8-201ENST00000429873 447 ntBASIC18.02■□□□□ 0.48
PMPCBO75439 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.02■□□□□ 0.48
PMPCBO75439 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.48
PMPCBO75439 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.02■□□□□ 0.48
PMPCBO75439 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.02■□□□□ 0.48
PMPCBO75439 AP000550.4-202ENST00000639755 178 ntBASIC18.02■□□□□ 0.48
PMPCBO75439 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PMPCBO75439 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PMPCBO75439 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PMPCBO75439 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.02■□□□□ 0.47
PMPCBO75439 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PMPCBO75439 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
PMPCBO75439 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.01■□□□□ 0.47
PMPCBO75439 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.01■□□□□ 0.47
PMPCBO75439 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.01■□□□□ 0.47
PMPCBO75439 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PMPCBO75439 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
PMPCBO75439 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 AL845331.1-201ENST00000424978 1190 ntBASIC18.01■□□□□ 0.47
PMPCBO75439 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.01■□□□□ 0.47
PMPCBO75439 DDX43P3-201ENST00000441064 443 ntBASIC18.01■□□□□ 0.47
PMPCBO75439 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.01■□□□□ 0.47
PMPCBO75439 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.01■□□□□ 0.47
PMPCBO75439 AC011840.4-201ENST00000578471 627 ntBASIC18.01■□□□□ 0.47
PMPCBO75439 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PMPCBO75439 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.01■□□□□ 0.47
PMPCBO75439 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.01■□□□□ 0.47
PMPCBO75439 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PMPCBO75439 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.01■□□□□ 0.47
PMPCBO75439 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PMPCBO75439 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PMPCBO75439 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18■□□□□ 0.47
PMPCBO75439 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18■□□□□ 0.47
PMPCBO75439 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PMPCBO75439 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PMPCBO75439 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms