Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN3O60637 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TSPAN3O60637 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.28■□□□□ 0.52
TSPAN3O60637 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TSPAN3O60637 AL355877.3-201ENST00000622820 899 ntBASIC18.28■□□□□ 0.52
TSPAN3O60637 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TSPAN3O60637 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
TSPAN3O60637 AP005117.1-201ENST00000584346 1413 ntBASIC18.28■□□□□ 0.52
TSPAN3O60637 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
TSPAN3O60637 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN3O60637 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN3O60637 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.28■□□□□ 0.52
TSPAN3O60637 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN3O60637 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.28■□□□□ 0.52
TSPAN3O60637 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TSPAN3O60637 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TSPAN3O60637 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TSPAN3O60637 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN3O60637 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN3O60637 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TSPAN3O60637 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.27■□□□□ 0.52
TSPAN3O60637 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.27■□□□□ 0.52
TSPAN3O60637 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.27■□□□□ 0.52
TSPAN3O60637 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN3O60637 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN3O60637 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN3O60637 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN3O60637 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN3O60637 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TSPAN3O60637 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN3O60637 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.27■□□□□ 0.52
TSPAN3O60637 FGFR3P6-201ENST00000457012 610 ntBASIC18.27■□□□□ 0.52
TSPAN3O60637 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.27■□□□□ 0.52
TSPAN3O60637 AC106795.1-205ENST00000512851 1056 ntBASIC18.27■□□□□ 0.52
TSPAN3O60637 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.27■□□□□ 0.52
TSPAN3O60637 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN3O60637 SLC25A6P4-201ENST00000586535 553 ntBASIC18.27■□□□□ 0.52
TSPAN3O60637 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.27■□□□□ 0.52
TSPAN3O60637 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN3O60637 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN3O60637 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TSPAN3O60637 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TSPAN3O60637 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
TSPAN3O60637 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TSPAN3O60637 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TSPAN3O60637 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TSPAN3O60637 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TSPAN3O60637 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.27■□□□□ 0.51
TSPAN3O60637 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TSPAN3O60637 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.27■□□□□ 0.51
TSPAN3O60637 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.26■□□□□ 0.51
TSPAN3O60637 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.26■□□□□ 0.51
TSPAN3O60637 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TSPAN3O60637 AC138028.4-201ENST00000564984 1845 ntBASIC18.26■□□□□ 0.51
TSPAN3O60637 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.26■□□□□ 0.51
TSPAN3O60637 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
TSPAN3O60637 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.26■□□□□ 0.51
TSPAN3O60637 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.26■□□□□ 0.51
TSPAN3O60637 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.26■□□□□ 0.51
TSPAN3O60637 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
TSPAN3O60637 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 AC148477.8-201ENST00000624298 468 ntBASIC18.26■□□□□ 0.51
TSPAN3O60637 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.26■□□□□ 0.51
TSPAN3O60637 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.26■□□□□ 0.51
TSPAN3O60637 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.26■□□□□ 0.51
TSPAN3O60637 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TSPAN3O60637 FZD10-202ENST00000539839 3282 ntBASIC18.26■□□□□ 0.51
TSPAN3O60637 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.26■□□□□ 0.51
TSPAN3O60637 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.26■□□□□ 0.51
TSPAN3O60637 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TSPAN3O60637 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TSPAN3O60637 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TSPAN3O60637 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TSPAN3O60637 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TSPAN3O60637 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.25■□□□□ 0.51
TSPAN3O60637 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TSPAN3O60637 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TSPAN3O60637 FLJ13224-201ENST00000313737 1514 ntBASIC18.25■□□□□ 0.51
TSPAN3O60637 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TSPAN3O60637 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.25■□□□□ 0.51
TSPAN3O60637 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TSPAN3O60637 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TSPAN3O60637 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TSPAN3O60637 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.25■□□□□ 0.51
TSPAN3O60637 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms