Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
PRKNO60260 KRT16P4-201ENST00000453883 522 ntBASIC16.51■□□□□ 0.23
PRKNO60260 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.51■□□□□ 0.23
PRKNO60260 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.51■□□□□ 0.23
PRKNO60260 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.51■□□□□ 0.23
PRKNO60260 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.51■□□□□ 0.23
PRKNO60260 AL691432.3-201ENST00000621860 400 ntBASIC16.51■□□□□ 0.23
PRKNO60260 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.51■□□□□ 0.23
PRKNO60260 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKNO60260 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKNO60260 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKNO60260 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKNO60260 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PRKNO60260 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.51■□□□□ 0.23
PRKNO60260 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PRKNO60260 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PRKNO60260 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKNO60260 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PRKNO60260 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.51■□□□□ 0.23
PRKNO60260 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKNO60260 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRKNO60260 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.51■□□□□ 0.23
PRKNO60260 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRKNO60260 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.5■□□□□ 0.23
PRKNO60260 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRKNO60260 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.5■□□□□ 0.23
PRKNO60260 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.5■□□□□ 0.23
PRKNO60260 AC007967.3-201ENST00000434308 558 ntBASIC16.5■□□□□ 0.23
PRKNO60260 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.5■□□□□ 0.23
PRKNO60260 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.5■□□□□ 0.23
PRKNO60260 AC009533.2-201ENST00000543664 586 ntBASIC16.5■□□□□ 0.23
PRKNO60260 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.5■□□□□ 0.23
PRKNO60260 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.5■□□□□ 0.23
PRKNO60260 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.5■□□□□ 0.23
PRKNO60260 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.5■□□□□ 0.23
PRKNO60260 AC011467.2-201ENST00000598425 242 ntBASIC16.5■□□□□ 0.23
PRKNO60260 AL591684.3-201ENST00000605187 298 ntBASIC16.5■□□□□ 0.23
PRKNO60260 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.5■□□□□ 0.23
PRKNO60260 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.5■□□□□ 0.23
PRKNO60260 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.5■□□□□ 0.23
PRKNO60260 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.5■□□□□ 0.23
PRKNO60260 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRKNO60260 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
PRKNO60260 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRKNO60260 INTS4P1-201ENST00000438455 1935 ntBASIC16.49■□□□□ 0.23
PRKNO60260 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.49■□□□□ 0.23
PRKNO60260 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.49■□□□□ 0.23
PRKNO60260 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
PRKNO60260 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.49■□□□□ 0.23
PRKNO60260 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.49■□□□□ 0.23
PRKNO60260 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
PRKNO60260 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.49■□□□□ 0.23
PRKNO60260 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.49■□□□□ 0.23
PRKNO60260 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.49■□□□□ 0.23
PRKNO60260 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.49■□□□□ 0.23
PRKNO60260 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRKNO60260 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.49■□□□□ 0.23
PRKNO60260 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 AC134043.2-201ENST00000624206 2238 ntBASIC16.49■□□□□ 0.23
PRKNO60260 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRKNO60260 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRKNO60260 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms