Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRICKLE3O43900 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.02■□□□□ 0.32
PRICKLE3O43900 AP000867.4-201ENST00000641616 219 ntBASIC17.02■□□□□ 0.32
PRICKLE3O43900 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.02■□□□□ 0.32
PRICKLE3O43900 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PRICKLE3O43900 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRICKLE3O43900 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRICKLE3O43900 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRICKLE3O43900 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PRICKLE3O43900 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PRICKLE3O43900 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRICKLE3O43900 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRICKLE3O43900 AC026471.1-201ENST00000564629 3026 ntBASIC17.02■□□□□ 0.31
PRICKLE3O43900 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 ABCD1P5-201ENST00000445663 754 ntBASIC17.01■□□□□ 0.31
PRICKLE3O43900 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 REXO1L6P-202ENST00000619970 1078 ntBASIC17.01■□□□□ 0.31
PRICKLE3O43900 SIRPAP1-201ENST00000448467 1770 ntBASIC17.01■□□□□ 0.31
PRICKLE3O43900 AC068880.1-201ENST00000507289 2297 ntBASIC17.01■□□□□ 0.31
PRICKLE3O43900 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRICKLE3O43900 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
PRICKLE3O43900 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PRICKLE3O43900 AL353593.2-201ENST00000602529 1483 ntBASIC17■□□□□ 0.31
PRICKLE3O43900 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17■□□□□ 0.31
PRICKLE3O43900 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17■□□□□ 0.31
PRICKLE3O43900 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE3O43900 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE3O43900 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17■□□□□ 0.31
PRICKLE3O43900 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE3O43900 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE3O43900 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17■□□□□ 0.31
PRICKLE3O43900 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17■□□□□ 0.31
PRICKLE3O43900 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17■□□□□ 0.31
PRICKLE3O43900 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17■□□□□ 0.31
PRICKLE3O43900 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17■□□□□ 0.31
PRICKLE3O43900 AC106795.1-205ENST00000512851 1056 ntBASIC17■□□□□ 0.31
PRICKLE3O43900 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
PRICKLE3O43900 LINC00304-203ENST00000565008 1864 ntBASIC17■□□□□ 0.31
PRICKLE3O43900 AC111152.3-201ENST00000569699 673 ntBASIC17■□□□□ 0.31
PRICKLE3O43900 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17■□□□□ 0.31
PRICKLE3O43900 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17■□□□□ 0.31
PRICKLE3O43900 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE3O43900 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE3O43900 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17■□□□□ 0.31
PRICKLE3O43900 AP001269.4-201ENST00000609611 512 ntBASIC17■□□□□ 0.31
PRICKLE3O43900 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17■□□□□ 0.31
PRICKLE3O43900 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17■□□□□ 0.31
PRICKLE3O43900 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE3O43900 LINC01451-201ENST00000623792 534 ntBASIC17■□□□□ 0.31
PRICKLE3O43900 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PRICKLE3O43900 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PRICKLE3O43900 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE3O43900 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17■□□□□ 0.31
PRICKLE3O43900 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE3O43900 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRICKLE3O43900 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.99■□□□□ 0.31
PRICKLE3O43900 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.99■□□□□ 0.31
PRICKLE3O43900 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 PMPCAP1-201ENST00000508114 1576 ntBASIC16.99■□□□□ 0.31
PRICKLE3O43900 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.99■□□□□ 0.31
PRICKLE3O43900 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 KRT8P10-201ENST00000450021 1447 ntBASIC16.99■□□□□ 0.31
PRICKLE3O43900 AP005117.1-201ENST00000584346 1413 ntBASIC16.99■□□□□ 0.31
PRICKLE3O43900 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.99■□□□□ 0.31
PRICKLE3O43900 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PRICKLE3O43900 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.99■□□□□ 0.31
PRICKLE3O43900 EMBP1-201ENST00000458200 901 ntBASIC16.99■□□□□ 0.31
PRICKLE3O43900 AC002558.1-201ENST00000488906 803 ntBASIC16.99■□□□□ 0.31
PRICKLE3O43900 RN7SL510P-201ENST00000581311 263 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms