Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC133561.5-201ENST00000635547 218 ntBASIC17.66■□□□□ 0.42
PHGDHO43175 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.66■□□□□ 0.42
PHGDHO43175 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PHGDHO43175 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.66■□□□□ 0.42
PHGDHO43175 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PHGDHO43175 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.66■□□□□ 0.42
PHGDHO43175 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.66■□□□□ 0.42
PHGDHO43175 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.66■□□□□ 0.42
PHGDHO43175 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
PHGDHO43175 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.66■□□□□ 0.42
PHGDHO43175 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.66■□□□□ 0.42
PHGDHO43175 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PHGDHO43175 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHGDHO43175 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PHGDHO43175 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PHGDHO43175 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.65■□□□□ 0.42
PHGDHO43175 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.65■□□□□ 0.42
PHGDHO43175 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.65■□□□□ 0.42
PHGDHO43175 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PHGDHO43175 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PHGDHO43175 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.65■□□□□ 0.42
PHGDHO43175 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.65■□□□□ 0.42
PHGDHO43175 KRT18P48-201ENST00000434763 852 ntBASIC17.65■□□□□ 0.42
PHGDHO43175 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.65■□□□□ 0.42
PHGDHO43175 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.65■□□□□ 0.42
PHGDHO43175 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PHGDHO43175 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PHGDHO43175 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PHGDHO43175 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.65■□□□□ 0.42
PHGDHO43175 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHGDHO43175 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PHGDHO43175 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.65■□□□□ 0.42
PHGDHO43175 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PHGDHO43175 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.64■□□□□ 0.42
PHGDHO43175 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PHGDHO43175 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHGDHO43175 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHGDHO43175 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.64■□□□□ 0.41
PHGDHO43175 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.64■□□□□ 0.41
PHGDHO43175 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PHGDHO43175 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.64■□□□□ 0.41
PHGDHO43175 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHGDHO43175 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHGDHO43175 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHGDHO43175 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHGDHO43175 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.64■□□□□ 0.41
PHGDHO43175 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHGDHO43175 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.64■□□□□ 0.41
PHGDHO43175 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
PHGDHO43175 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.64■□□□□ 0.41
PHGDHO43175 HLA-F-220ENST00000434407 884 ntBASIC17.64■□□□□ 0.41
PHGDHO43175 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.64■□□□□ 0.41
PHGDHO43175 AL031432.5-201ENST00000641059 760 ntBASIC17.64■□□□□ 0.41
PHGDHO43175 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHGDHO43175 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.64■□□□□ 0.41
PHGDHO43175 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PHGDHO43175 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.64■□□□□ 0.41
PHGDHO43175 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHGDHO43175 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHGDHO43175 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHGDHO43175 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.64■□□□□ 0.41
PHGDHO43175 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.63■□□□□ 0.41
PHGDHO43175 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PHGDHO43175 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHGDHO43175 TERF1P1-201ENST00000311003 1181 ntBASIC17.63■□□□□ 0.41
PHGDHO43175 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms