Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.04■□□□□ 0.16
SURF4O15260 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.04■□□□□ 0.16
SURF4O15260 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.04■□□□□ 0.16
SURF4O15260 AC113404.2-201ENST00000507884 177 ntBASIC16.04■□□□□ 0.16
SURF4O15260 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SURF4O15260 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.04■□□□□ 0.16
SURF4O15260 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.04■□□□□ 0.16
SURF4O15260 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.04■□□□□ 0.16
SURF4O15260 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.04■□□□□ 0.16
SURF4O15260 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.04■□□□□ 0.16
SURF4O15260 AC097493.4-201ENST00000641197 219 ntBASIC16.04■□□□□ 0.16
SURF4O15260 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SURF4O15260 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SURF4O15260 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SURF4O15260 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SURF4O15260 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SURF4O15260 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SURF4O15260 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SURF4O15260 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SURF4O15260 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SURF4O15260 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.03■□□□□ 0.16
SURF4O15260 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SURF4O15260 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SURF4O15260 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SURF4O15260 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 HMGA1P5-201ENST00000412453 271 ntBASIC16.03■□□□□ 0.16
SURF4O15260 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.03■□□□□ 0.16
SURF4O15260 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SURF4O15260 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.03■□□□□ 0.16
SURF4O15260 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
SURF4O15260 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.03■□□□□ 0.16
SURF4O15260 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 AC005363.2-201ENST00000618631 242 ntBASIC16.03■□□□□ 0.16
SURF4O15260 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.03■□□□□ 0.16
SURF4O15260 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SURF4O15260 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.03■□□□□ 0.16
SURF4O15260 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.02■□□□□ 0.16
SURF4O15260 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.02■□□□□ 0.16
SURF4O15260 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.02■□□□□ 0.16
SURF4O15260 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
SURF4O15260 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.02■□□□□ 0.16
SURF4O15260 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SURF4O15260 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.02■□□□□ 0.16
SURF4O15260 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
SURF4O15260 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 LIN28AP1-201ENST00000429574 405 ntBASIC16.02■□□□□ 0.16
SURF4O15260 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SURF4O15260 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.02■□□□□ 0.16
SURF4O15260 NEK4P2-201ENST00000580004 1012 ntBASIC16.02■□□□□ 0.16
SURF4O15260 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.02■□□□□ 0.16
SURF4O15260 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.02■□□□□ 0.16
SURF4O15260 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.02■□□□□ 0.16
SURF4O15260 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SURF4O15260 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SURF4O15260 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
SURF4O15260 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.02■□□□□ 0.15
SURF4O15260 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SURF4O15260 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.02■□□□□ 0.15
SURF4O15260 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SURF4O15260 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SURF4O15260 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
SURF4O15260 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SURF4O15260 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SURF4O15260 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.02■□□□□ 0.15
SURF4O15260 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SURF4O15260 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SURF4O15260 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SURF4O15260 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SURF4O15260 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SURF4O15260 KRT8P47-201ENST00000604727 1398 ntBASIC16.01■□□□□ 0.15
SURF4O15260 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
SURF4O15260 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms