Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
CHL1O00533 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHL1O00533 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHL1O00533 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHL1O00533 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHL1O00533 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CHL1O00533 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHL1O00533 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHL1O00533 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHL1O00533 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHL1O00533 KLF4P1-201ENST00000412782 1185 ntBASIC22.72■■□□□ 1.23
CHL1O00533 AP000347.1-202ENST00000435868 847 ntBASIC22.72■■□□□ 1.23
CHL1O00533 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC22.72■■□□□ 1.23
CHL1O00533 COPE-211ENST00000600932 1144 ntTSL 5 BASIC22.72■■□□□ 1.23
CHL1O00533 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHL1O00533 AMT-250ENST00000637682 1823 ntTSL 5 BASIC22.72■■□□□ 1.23
CHL1O00533 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHL1O00533 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC22.72■■□□□ 1.23
CHL1O00533 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHL1O00533 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CHL1O00533 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
CHL1O00533 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
CHL1O00533 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CHL1O00533 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.72■■□□□ 1.23
CHL1O00533 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC22.71■■□□□ 1.23
CHL1O00533 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHL1O00533 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC22.71■■□□□ 1.23
CHL1O00533 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.71■■□□□ 1.23
CHL1O00533 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC22.71■■□□□ 1.23
CHL1O00533 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHL1O00533 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHL1O00533 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHL1O00533 MYCLP1-201ENST00000372451 1075 ntBASIC22.71■■□□□ 1.23
CHL1O00533 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.71■■□□□ 1.23
CHL1O00533 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.71■■□□□ 1.23
CHL1O00533 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.71■■□□□ 1.23
CHL1O00533 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC22.71■■□□□ 1.23
CHL1O00533 BX640515.1-201ENST00000617215 977 ntBASIC22.71■■□□□ 1.23
CHL1O00533 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHL1O00533 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.71■■□□□ 1.23
CHL1O00533 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC22.71■■□□□ 1.23
CHL1O00533 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CHL1O00533 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
CHL1O00533 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC22.71■■□□□ 1.23
CHL1O00533 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHL1O00533 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHL1O00533 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
CHL1O00533 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHL1O00533 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHL1O00533 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHL1O00533 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHL1O00533 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CHL1O00533 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.7■■□□□ 1.22
CHL1O00533 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.7■■□□□ 1.22
CHL1O00533 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CHL1O00533 AC079776.4-201ENST00000511039 504 ntBASIC22.7■■□□□ 1.22
CHL1O00533 STK19B-204ENST00000512515 211 ntBASIC22.7■■□□□ 1.22
CHL1O00533 OR7E14P-202ENST00000530490 1290 ntBASIC22.7■■□□□ 1.22
CHL1O00533 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
CHL1O00533 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.7■■□□□ 1.22
CHL1O00533 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC22.7■■□□□ 1.22
CHL1O00533 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHL1O00533 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.7■■□□□ 1.22
CHL1O00533 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CHL1O00533 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHL1O00533 AC007613.1-201ENST00000572811 2597 ntBASIC22.69■■□□□ 1.22
CHL1O00533 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHL1O00533 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHL1O00533 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHL1O00533 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHL1O00533 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CHL1O00533 GATB-213ENST00000515812 1893 ntTSL 5 BASIC22.69■■□□□ 1.22
CHL1O00533 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.69■■□□□ 1.22
CHL1O00533 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC22.69■■□□□ 1.22
CHL1O00533 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHL1O00533 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHL1O00533 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CHL1O00533 SIGLEC30P-201ENST00000455569 941 ntBASIC22.69■■□□□ 1.22
CHL1O00533 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC22.69■■□□□ 1.22
CHL1O00533 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC22.69■■□□□ 1.22
CHL1O00533 PRKN-208ENST00000610470 531 ntTSL 2 BASIC22.69■■□□□ 1.22
CHL1O00533 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.69■■□□□ 1.22
CHL1O00533 PRKN-209ENST00000612485 225 ntTSL 5 BASIC22.69■■□□□ 1.22
CHL1O00533 AC008735.5-201ENST00000623544 497 ntBASIC22.69■■□□□ 1.22
CHL1O00533 AC116407.3-201ENST00000623905 1129 ntBASIC22.69■■□□□ 1.22
CHL1O00533 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHL1O00533 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHL1O00533 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHL1O00533 AL355312.1-201ENST00000407115 2176 ntBASIC22.69■■□□□ 1.22
CHL1O00533 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
CHL1O00533 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CHL1O00533 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC22.68■■□□□ 1.22
CHL1O00533 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHL1O00533 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.68■■□□□ 1.22
CHL1O00533 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHL1O00533 KRT18P27-201ENST00000427733 1299 ntBASIC22.68■■□□□ 1.22
CHL1O00533 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.68■■□□□ 1.22
CHL1O00533 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22.68■■□□□ 1.22
CHL1O00533 AC139887.3-201ENST00000568585 713 ntBASIC22.68■■□□□ 1.22
CHL1O00533 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms