Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.39■□□□□ 0.37
TAF4O00268 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TAF4O00268 AC211486.1-202ENST00000416371 468 ntBASIC17.39■□□□□ 0.37
TAF4O00268 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.39■□□□□ 0.37
TAF4O00268 AC211476.1-201ENST00000503899 468 ntBASIC17.39■□□□□ 0.37
TAF4O00268 RNA5SP415-201ENST00000517246 115 ntBASIC17.39■□□□□ 0.37
TAF4O00268 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.39■□□□□ 0.37
TAF4O00268 Z83851.2-201ENST00000609564 659 ntBASIC17.39■□□□□ 0.37
TAF4O00268 AL596442.2-201ENST00000610240 980 ntBASIC17.39■□□□□ 0.37
TAF4O00268 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.39■□□□□ 0.37
TAF4O00268 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.39■□□□□ 0.37
TAF4O00268 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TAF4O00268 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TAF4O00268 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.39■□□□□ 0.37
TAF4O00268 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
TAF4O00268 AL353692.3-201ENST00000407031 1396 ntBASIC17.39■□□□□ 0.37
TAF4O00268 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TAF4O00268 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.38■□□□□ 0.37
TAF4O00268 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 AC104417.2-201ENST00000562989 1793 ntBASIC17.38■□□□□ 0.37
TAF4O00268 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TAF4O00268 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.38■□□□□ 0.37
TAF4O00268 AP006288.1-201ENST00000446065 395 ntBASIC17.38■□□□□ 0.37
TAF4O00268 AC092910.1-201ENST00000482027 1129 ntBASIC17.38■□□□□ 0.37
TAF4O00268 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.38■□□□□ 0.37
TAF4O00268 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.38■□□□□ 0.37
TAF4O00268 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.38■□□□□ 0.37
TAF4O00268 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 AP001269.4-201ENST00000609611 512 ntBASIC17.38■□□□□ 0.37
TAF4O00268 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TAF4O00268 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TAF4O00268 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TAF4O00268 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
TAF4O00268 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TAF4O00268 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TAF4O00268 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
TAF4O00268 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.37■□□□□ 0.37
TAF4O00268 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TAF4O00268 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TAF4O00268 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.37■□□□□ 0.37
TAF4O00268 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.37■□□□□ 0.37
TAF4O00268 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TAF4O00268 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TAF4O00268 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TAF4O00268 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TAF4O00268 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TAF4O00268 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.37■□□□□ 0.37
TAF4O00268 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.37■□□□□ 0.37
TAF4O00268 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.37■□□□□ 0.37
TAF4O00268 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.37■□□□□ 0.37
TAF4O00268 AC012640.2-201ENST00000561606 901 ntBASIC17.37■□□□□ 0.37
TAF4O00268 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TAF4O00268 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TAF4O00268 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TAF4O00268 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.37■□□□□ 0.37
TAF4O00268 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TAF4O00268 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TAF4O00268 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TAF4O00268 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TAF4O00268 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TAF4O00268 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
TAF4O00268 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.36■□□□□ 0.37
TAF4O00268 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TAF4O00268 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.36■□□□□ 0.37
TAF4O00268 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms