Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 UPK3BP1-201ENST00000428678 509 ntBASIC17.71■□□□□ 0.43
CFAP99D6REC4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.71■□□□□ 0.43
CFAP99D6REC4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.71■□□□□ 0.43
CFAP99D6REC4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.71■□□□□ 0.43
CFAP99D6REC4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.71■□□□□ 0.43
CFAP99D6REC4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.71■□□□□ 0.43
CFAP99D6REC4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CFAP99D6REC4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CFAP99D6REC4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.71■□□□□ 0.43
CFAP99D6REC4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CFAP99D6REC4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CFAP99D6REC4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CFAP99D6REC4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CFAP99D6REC4 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.71■□□□□ 0.42
CFAP99D6REC4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.71■□□□□ 0.42
CFAP99D6REC4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CFAP99D6REC4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFAP99D6REC4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFAP99D6REC4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFAP99D6REC4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CFAP99D6REC4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CFAP99D6REC4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 AC246785.2-201ENST00000432512 513 ntBASIC17.7■□□□□ 0.42
CFAP99D6REC4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFAP99D6REC4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.7■□□□□ 0.42
CFAP99D6REC4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFAP99D6REC4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFAP99D6REC4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CFAP99D6REC4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFAP99D6REC4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CFAP99D6REC4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CFAP99D6REC4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 AP002414.4-201ENST00000589764 1148 ntBASIC17.69■□□□□ 0.42
CFAP99D6REC4 AC093458.2-201ENST00000623150 629 ntBASIC17.69■□□□□ 0.42
CFAP99D6REC4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CFAP99D6REC4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CFAP99D6REC4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms