Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 AC092053.1-201ENST00000605787 1936 ntBASIC19.15■□□□□ 0.66
USP27XA6NNY8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
USP27XA6NNY8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.15■□□□□ 0.66
USP27XA6NNY8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP27XA6NNY8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.14■□□□□ 0.66
USP27XA6NNY8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
USP27XA6NNY8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
USP27XA6NNY8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP27XA6NNY8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
USP27XA6NNY8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP27XA6NNY8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP27XA6NNY8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
USP27XA6NNY8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.14■□□□□ 0.65
USP27XA6NNY8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP27XA6NNY8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP27XA6NNY8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
USP27XA6NNY8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP27XA6NNY8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.14■□□□□ 0.65
USP27XA6NNY8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP27XA6NNY8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
USP27XA6NNY8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
USP27XA6NNY8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP27XA6NNY8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
USP27XA6NNY8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 AC026366.1-201ENST00000488803 879 ntBASIC19.13■□□□□ 0.65
USP27XA6NNY8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 AC142086.2-201ENST00000569753 217 ntBASIC19.13■□□□□ 0.65
USP27XA6NNY8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.13■□□□□ 0.65
USP27XA6NNY8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 AC092068.3-201ENST00000587894 2016 ntBASIC19.13■□□□□ 0.65
USP27XA6NNY8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP27XA6NNY8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms