Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 CROCCP1-201ENST00000426910 5675 ntBASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 AC026691.1-201ENST00000602502 2017 ntBASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRDV1A0A1B0GX56 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 LYSMD4-203ENST00000378904 2122 ntBASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 WWOX-216ENST00000569818 525 ntBASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 AC008687.5-201ENST00000593746 558 ntBASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 AL109923.1-201ENST00000618799 583 ntBASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 PCDHA1-201ENST00000378133 2726 ntBASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
TRDV1A0A1B0GX56 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.59■□□□□ 0.09
TRDV1A0A1B0GX56 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms