Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 YBX2P1-201ENST00000394192 760 ntBASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 GPX1P2-201ENST00000429271 606 ntBASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 AC007967.2-201ENST00000432613 625 ntBASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SNX11Q9Y5W9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 LAGE3P1-201ENST00000425356 484 ntBASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 AC112482.1-201ENST00000492080 688 ntBASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 AC040169.1-201ENST00000565382 521 ntBASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 AC132938.6-201ENST00000623828 1655 ntBASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SNX11Q9Y5W9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 GMCL1P1-201ENST00000463439 1581 ntBASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 AC097374.2-201ENST00000618617 1306 ntBASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 AL390961.4-201ENST00000623958 2535 ntBASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 RPS8P6-201ENST00000426177 609 ntBASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 RNA5SP416-201ENST00000516838 111 ntBASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 MIR3687-2-201ENST00000577708 61 ntBASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 AL139424.1-201ENST00000607572 797 ntBASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 MIR3687-1-201ENST00000614492 61 ntBASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 AC073592.3-201ENST00000625118 1834 ntBASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 AC079776.2-201ENST00000641154 1609 ntBASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SNX11Q9Y5W9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX11Q9Y5W9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms