Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA11Q9Y5H2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 HYMAI.1-201ENST00000620949 238 ntBASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA11Q9Y5H2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 LINC01311-201ENST00000565162 1445 ntBASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 RCN1P1-201ENST00000400413 996 ntBASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 GPR32P1-201ENST00000601788 811 ntBASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 AL353692.3-201ENST00000407031 1396 ntBASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGA11Q9Y5H2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 AC084018.2-201ENST00000613093 2607 ntBASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 AC022616.7-201ENST00000525383 220 ntBASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 RN7SL850P-201ENST00000579959 291 ntBASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms