Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 STK25P1-201ENST00000585406 838 ntBASIC18.48■□□□□ 0.55
YIPF1Q9Y548 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 AC004706.3-202ENST00000621574 984 ntBASIC18.48■□□□□ 0.55
YIPF1Q9Y548 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
YIPF1Q9Y548 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 SIGLEC30P-201ENST00000455569 941 ntBASIC18.47■□□□□ 0.55
YIPF1Q9Y548 AC108751.1-201ENST00000490852 363 ntBASIC18.47■□□□□ 0.55
YIPF1Q9Y548 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 NCF1C-201ENST00000438382 1427 ntBASIC18.47■□□□□ 0.55
YIPF1Q9Y548 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.47■□□□□ 0.55
YIPF1Q9Y548 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 IGHV3-52-201ENST00000519770 353 ntBASIC18.46■□□□□ 0.55
YIPF1Q9Y548 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 AC006504.4-201ENST00000592118 1568 ntBASIC18.46■□□□□ 0.55
YIPF1Q9Y548 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.46■□□□□ 0.55
YIPF1Q9Y548 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.46■□□□□ 0.54
YIPF1Q9Y548 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
YIPF1Q9Y548 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 STK19B-204ENST00000512515 211 ntBASIC18.45■□□□□ 0.54
YIPF1Q9Y548 RNA5SP416-201ENST00000516838 111 ntBASIC18.45■□□□□ 0.54
YIPF1Q9Y548 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.45■□□□□ 0.54
YIPF1Q9Y548 AL139424.1-201ENST00000607572 797 ntBASIC18.45■□□□□ 0.54
YIPF1Q9Y548 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms