Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
NRXN3Q9Y4C0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
NRXN3Q9Y4C0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC24.64■■□□□ 1.54
NRXN3Q9Y4C0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
NRXN3Q9Y4C0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC24.64■■□□□ 1.54
NRXN3Q9Y4C0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC24.64■■□□□ 1.54
NRXN3Q9Y4C0 AL121761.2-201ENST00000598007 1648 ntBASIC24.64■■□□□ 1.54
NRXN3Q9Y4C0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
NRXN3Q9Y4C0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
NRXN3Q9Y4C0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NRXN3Q9Y4C0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NRXN3Q9Y4C0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NRXN3Q9Y4C0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC24.64■■□□□ 1.53
NRXN3Q9Y4C0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC24.64■■□□□ 1.53
NRXN3Q9Y4C0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
NRXN3Q9Y4C0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NRXN3Q9Y4C0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NRXN3Q9Y4C0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 IGHV3-52-201ENST00000519770 353 ntBASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 Z92544.3-201ENST00000624747 417 ntBASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC24.62■■□□□ 1.53
NRXN3Q9Y4C0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 KRT8P48-201ENST00000515599 1220 ntBASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 REXO1L3P-201ENST00000622202 1288 ntBASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 LINC00628-201ENST00000628516 1289 ntBASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 MIR661-201ENST00000384842 89 ntBASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 AJ011932.1-201ENST00000621707 465 ntBASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC24.61■■□□□ 1.53
NRXN3Q9Y4C0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC24.6■■□□□ 1.53
NRXN3Q9Y4C0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NRXN3Q9Y4C0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NRXN3Q9Y4C0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC24.6■■□□□ 1.53
NRXN3Q9Y4C0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC24.6■■□□□ 1.53
NRXN3Q9Y4C0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NRXN3Q9Y4C0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NRXN3Q9Y4C0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC24.6■■□□□ 1.53
NRXN3Q9Y4C0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms