Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NPIPA1Q9UND3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
NPIPA1Q9UND3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
NPIPA1Q9UND3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 AL024508.2-201ENST00000607749 1894 ntBASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NPIPA1Q9UND3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 NOC2LP1-202ENST00000452600 2235 ntBASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 AC068472.1-201ENST00000474589 881 ntBASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 AC064862.7-201ENST00000604520 867 ntBASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 AC114341.1-201ENST00000618070 349 ntBASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPIPA1Q9UND3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms