Protein–RNA interactions for Protein: Q9NV44

LINC00846, Putative uncharacterized protein encoded by LINC00846, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00846Q9NV44 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 CICP4-201ENST00000447359 2812 ntBASIC10.98□□□□□ -0.65
LINC00846Q9NV44 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC00846Q9NV44 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC00846Q9NV44 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 SP100-208ENST00000427101 1922 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC00846Q9NV44 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms