Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 AL357033.4-201ENST00000617703 1807 ntBASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 MIR2861-201ENST00000636310 90 ntBASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 CICP24-201ENST00000605464 2705 ntBASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 AL096828.2-201ENST00000567259 1965 ntBASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
CDC42SE1Q9NRR8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms