Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX6-2Q9C056 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.41□□□□□ -0.1
NKX6-2Q9C056 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NKX6-2Q9C056 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 AC092068.3-201ENST00000587894 2016 ntBASIC14.4□□□□□ -0.1
NKX6-2Q9C056 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
NKX6-2Q9C056 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.4□□□□□ -0.11
NKX6-2Q9C056 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.39□□□□□ -0.11
NKX6-2Q9C056 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-2Q9C056 AC016769.1-201ENST00000409132 1010 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms