Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 AL121761.2-201ENST00000598007 1648 ntBASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 AC079776.2-201ENST00000641154 1609 ntBASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 AL512638.1-201ENST00000457493 794 ntBASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 AC010507.1-201ENST00000633895 436 ntBASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 AC090340.1-201ENST00000620778 4980 ntBASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 AP000974.1-201ENST00000623909 2387 ntBASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNTNAP3Q9BZ76 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 AC004817.3-201ENST00000602957 2129 ntBASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 PIN1P1-201ENST00000412108 996 ntBASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 IGHV3-42-201ENST00000520410 361 ntBASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 REXO1L3P-201ENST00000622202 1288 ntBASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 AL512353.2-201ENST00000448759 1962 ntBASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 TUBB3P1-201ENST00000405796 1332 ntBASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 TNXA-203ENST00000507684 2038 ntBASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 AC025580.3-201ENST00000617932 1424 ntBASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 CU639417.3-201ENST00000624240 1404 ntBASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNTNAP3Q9BZ76 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.84■□□□□ 0.29
CNTNAP3Q9BZ76 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms