Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UPK3BQ9BT76 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 AC074051.2-201ENST00000565115 352 ntBASIC12.38□□□□□ -0.43
UPK3BQ9BT76 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.38□□□□□ -0.43
UPK3BQ9BT76 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 LINC01126-201ENST00000623515 1646 ntBASIC12.37□□□□□ -0.43
UPK3BQ9BT76 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 AL513477.1-201ENST00000602865 2407 ntBASIC12.37□□□□□ -0.43
UPK3BQ9BT76 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 IGHV3-47-201ENST00000425060 335 ntBASIC12.37□□□□□ -0.43
UPK3BQ9BT76 TPM4P1-201ENST00000436100 807 ntBASIC12.37□□□□□ -0.43
UPK3BQ9BT76 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UPK3BQ9BT76 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms