Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CRAMP1Q96RY5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CRAMP1Q96RY5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.58■■□□□ 1.04
CRAMP1Q96RY5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CRAMP1Q96RY5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CRAMP1Q96RY5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CRAMP1Q96RY5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRAMP1Q96RY5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CRAMP1Q96RY5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 AL139400.1-201ENST00000366220 510 ntBASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 MYCLP1-201ENST00000372451 1075 ntBASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 MIR770-201ENST00000390219 98 ntBASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 AC106028.4-201ENST00000614509 607 ntBASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 AC091812.2-201ENST00000619081 385 ntBASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 AL513210.1-201ENST00000629608 234 ntBASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 AC092902.6-201ENST00000641783 218 ntBASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CRAMP1Q96RY5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 TSEN15P1-201ENST00000423257 515 ntBASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms