Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC23.27■■□□□ 1.31
NBPF4Q96M43 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
NBPF4Q96M43 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC23.26■■□□□ 1.31
NBPF4Q96M43 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NBPF4Q96M43 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NBPF4Q96M43 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NBPF4Q96M43 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC23.26■■□□□ 1.31
NBPF4Q96M43 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC23.26■■□□□ 1.31
NBPF4Q96M43 AC097637.2-201ENST00000624096 1997 ntBASIC23.26■■□□□ 1.31
NBPF4Q96M43 BX276092.7-203ENST00000637198 1536 ntBASIC23.26■■□□□ 1.31
NBPF4Q96M43 AC009336.1-201ENST00000608941 1553 ntBASIC23.26■■□□□ 1.31
NBPF4Q96M43 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NBPF4Q96M43 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
NBPF4Q96M43 AIRN-201ENST00000601203 4374 ntBASIC23.26■■□□□ 1.31
NBPF4Q96M43 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC23.25■■□□□ 1.31
NBPF4Q96M43 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NBPF4Q96M43 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
NBPF4Q96M43 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NBPF4Q96M43 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NBPF4Q96M43 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NBPF4Q96M43 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
NBPF4Q96M43 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NBPF4Q96M43 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23.25■■□□□ 1.31
NBPF4Q96M43 HTR5BP-201ENST00000430851 1154 ntBASIC23.25■■□□□ 1.31
NBPF4Q96M43 DDX43P3-201ENST00000441064 443 ntBASIC23.25■■□□□ 1.31
NBPF4Q96M43 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
NBPF4Q96M43 CFL1-202ENST00000524553 860 ntTSL 2 BASIC23.25■■□□□ 1.31
NBPF4Q96M43 POLD4-207ENST00000531239 584 ntTSL 2 BASIC23.25■■□□□ 1.31
NBPF4Q96M43 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC23.25■■□□□ 1.31
NBPF4Q96M43 REXO1L9P-201ENST00000604264 2108 ntBASIC23.25■■□□□ 1.31
NBPF4Q96M43 AL353135.1-201ENST00000606729 504 ntBASIC23.25■■□□□ 1.31
NBPF4Q96M43 C20orf181-201ENST00000623918 480 ntBASIC23.25■■□□□ 1.31
NBPF4Q96M43 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.25■■□□□ 1.31
NBPF4Q96M43 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
NBPF4Q96M43 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NBPF4Q96M43 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
NBPF4Q96M43 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NBPF4Q96M43 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
NBPF4Q96M43 AC093503.3-201ENST00000624917 2352 ntBASIC23.25■■□□□ 1.31
NBPF4Q96M43 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
NBPF4Q96M43 GPR89P-201ENST00000407924 1495 ntBASIC23.24■■□□□ 1.31
NBPF4Q96M43 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NBPF4Q96M43 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC23.24■■□□□ 1.31
NBPF4Q96M43 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NBPF4Q96M43 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NBPF4Q96M43 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.24■■□□□ 1.31
NBPF4Q96M43 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NBPF4Q96M43 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.24■■□□□ 1.31
NBPF4Q96M43 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NBPF4Q96M43 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NBPF4Q96M43 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
NBPF4Q96M43 AL020996.1-203ENST00000536896 2307 ntBASIC23.24■■□□□ 1.31
NBPF4Q96M43 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NBPF4Q96M43 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NBPF4Q96M43 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NBPF4Q96M43 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.24■■□□□ 1.31
NBPF4Q96M43 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
NBPF4Q96M43 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC23.24■■□□□ 1.31
NBPF4Q96M43 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC23.24■■□□□ 1.31
NBPF4Q96M43 KRT18P28-201ENST00000453838 1332 ntBASIC23.24■■□□□ 1.31
NBPF4Q96M43 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC23.24■■□□□ 1.31
NBPF4Q96M43 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NBPF4Q96M43 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NBPF4Q96M43 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NBPF4Q96M43 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC23.23■■□□□ 1.31
NBPF4Q96M43 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
NBPF4Q96M43 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
NBPF4Q96M43 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC23.23■■□□□ 1.31
NBPF4Q96M43 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NBPF4Q96M43 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
NBPF4Q96M43 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NBPF4Q96M43 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NBPF4Q96M43 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.23■■□□□ 1.31
NBPF4Q96M43 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
NBPF4Q96M43 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC23.23■■□□□ 1.31
NBPF4Q96M43 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC23.23■■□□□ 1.31
NBPF4Q96M43 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.23■■□□□ 1.31
NBPF4Q96M43 AL078644.1-201ENST00000609881 752 ntBASIC23.23■■□□□ 1.31
NBPF4Q96M43 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC23.23■■□□□ 1.31
NBPF4Q96M43 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
NBPF4Q96M43 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NBPF4Q96M43 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NBPF4Q96M43 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NBPF4Q96M43 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NBPF4Q96M43 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NBPF4Q96M43 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NBPF4Q96M43 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NBPF4Q96M43 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NBPF4Q96M43 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
NBPF4Q96M43 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC23.22■■□□□ 1.31
NBPF4Q96M43 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NBPF4Q96M43 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NBPF4Q96M43 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
NBPF4Q96M43 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
NBPF4Q96M43 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NBPF4Q96M43 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NBPF4Q96M43 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
NBPF4Q96M43 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NBPF4Q96M43 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
NBPF4Q96M43 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms