Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf42Q8N5U0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf42Q8N5U0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C11orf42Q8N5U0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
C11orf42Q8N5U0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
C11orf42Q8N5U0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 KRT18P65-201ENST00000439811 1286 ntBASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 AP002383.4-201ENST00000442518 975 ntBASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 BX276092.5-203ENST00000456199 560 ntBASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 AC068472.1-201ENST00000474589 881 ntBASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 NPAP1P7-201ENST00000613027 823 ntBASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C11orf42Q8N5U0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 TSSC2-201ENST00000450217 709 ntBASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 AC009154.2-201ENST00000621177 724 ntBASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C11orf42Q8N5U0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms