Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.74■□□□□ 0.27
ARHGEF39Q8N4T4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 KRT8P10-201ENST00000450021 1447 ntBASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 AP002469.2-201ENST00000531724 424 ntBASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 AL160237.2-201ENST00000556165 472 ntBASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 AC008608.2-201ENST00000606089 416 ntBASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.73■□□□□ 0.27
ARHGEF39Q8N4T4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 AC002558.1-201ENST00000488906 803 ntBASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 AC132938.5-201ENST00000624980 1813 ntBASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 AC012317.2-201ENST00000623305 2251 ntBASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ARHGEF39Q8N4T4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 MTDHP3-201ENST00000594186 672 ntBASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.71■□□□□ 0.27
ARHGEF39Q8N4T4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ARHGEF39Q8N4T4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ARHGEF39Q8N4T4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ARHGEF39Q8N4T4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
ARHGEF39Q8N4T4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARHGEF39Q8N4T4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms