Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 AC011467.2-201ENST00000598425 242 ntBASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.22■□□□□ 0.67
ZC3H3Q8IXZ2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 MYCLP1-201ENST00000372451 1075 ntBASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 FAM220CP-201ENST00000395253 831 ntBASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZC3H3Q8IXZ2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 AC233702.3-201ENST00000578656 1387 ntBASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 LTB4R2-202ENST00000528054 3092 ntBASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 AC080080.1-201ENST00000625121 2420 ntBASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 AC109462.3-201ENST00000573934 613 ntBASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 MIR3180-1-201ENST00000580374 94 ntBASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 MIR3180-3-201ENST00000584616 94 ntBASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 AL358472.4-201ENST00000633140 710 ntBASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 AL353593.2-201ENST00000602529 1483 ntBASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZC3H3Q8IXZ2 IER3-202ENST00000376377 1350 ntBASIC19.19■□□□□ 0.66
ZC3H3Q8IXZ2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H3Q8IXZ2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H3Q8IXZ2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H3Q8IXZ2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H3Q8IXZ2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.19■□□□□ 0.66
ZC3H3Q8IXZ2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H3Q8IXZ2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZC3H3Q8IXZ2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.19■□□□□ 0.66
ZC3H3Q8IXZ2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.19■□□□□ 0.66
ZC3H3Q8IXZ2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ZC3H3Q8IXZ2 AC103564.2-201ENST00000432853 1299 ntBASIC19.19■□□□□ 0.66
ZC3H3Q8IXZ2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms