Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 KRT8P47-201ENST00000604727 1398 ntBASIC19.16■□□□□ 0.66
HERC6Q8IVU3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 GPR89P-201ENST00000407924 1495 ntBASIC19.16■□□□□ 0.66
HERC6Q8IVU3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 PRSS29P-201ENST00000440800 595 ntBASIC19.15■□□□□ 0.66
HERC6Q8IVU3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HERC6Q8IVU3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.14■□□□□ 0.66
HERC6Q8IVU3 AC132938.6-201ENST00000623828 1655 ntBASIC19.14■□□□□ 0.66
HERC6Q8IVU3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.14■□□□□ 0.66
HERC6Q8IVU3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
HERC6Q8IVU3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.14■□□□□ 0.66
HERC6Q8IVU3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 AC103564.2-201ENST00000432853 1299 ntBASIC19.14■□□□□ 0.65
HERC6Q8IVU3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HERC6Q8IVU3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 AL035633.1-201ENST00000406139 838 ntBASIC19.13■□□□□ 0.65
HERC6Q8IVU3 AL020989.1-201ENST00000422979 469 ntBASIC19.13■□□□□ 0.65
HERC6Q8IVU3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 IGHV3-65-201ENST00000523210 341 ntBASIC19.13■□□□□ 0.65
HERC6Q8IVU3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 AC027612.4-201ENST00000605371 583 ntBASIC19.13■□□□□ 0.65
HERC6Q8IVU3 AC008667.4-201ENST00000607370 168 ntBASIC19.13■□□□□ 0.65
HERC6Q8IVU3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.13■□□□□ 0.65
HERC6Q8IVU3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms