Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ZFHX4Q86UP3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.23
ZFHX4Q86UP3 FAM86MP-201ENST00000340703 885 ntBASIC16.52■□□□□ 0.23
ZFHX4Q86UP3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZFHX4Q86UP3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.52■□□□□ 0.23
ZFHX4Q86UP3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ZFHX4Q86UP3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
ZFHX4Q86UP3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 BCAR1-209ENST00000546196 1340 ntBASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 CRYGEP-201ENST00000412192 528 ntBASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 KRT18P65-201ENST00000439811 1286 ntBASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.51■□□□□ 0.23
ZFHX4Q86UP3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 ESPNP-201ENST00000270691 2015 ntBASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 AC067863.1-201ENST00000494933 530 ntBASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 REXO1L6P-201ENST00000603433 1515 ntBASIC16.5■□□□□ 0.23
ZFHX4Q86UP3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 RN7SL190P-201ENST00000582519 257 ntBASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 AC092552.1-201ENST00000547243 906 ntBASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.49■□□□□ 0.23
ZFHX4Q86UP3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFHX4Q86UP3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFHX4Q86UP3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFHX4Q86UP3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ZFHX4Q86UP3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.48■□□□□ 0.23
ZFHX4Q86UP3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.48■□□□□ 0.23
ZFHX4Q86UP3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.48■□□□□ 0.23
ZFHX4Q86UP3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.48■□□□□ 0.23
ZFHX4Q86UP3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFHX4Q86UP3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ZFHX4Q86UP3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms