Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 AC012317.2-201ENST00000623305 2251 ntBASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 INGX-201ENST00000359239 846 ntBASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.57
MRPL55Q7Z7F7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC11.46□□□□□ -0.58
MRPL55Q7Z7F7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 ECEL1P2-202ENST00000465689 757 ntBASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 MIR3917-201ENST00000580971 93 ntBASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 FAM87A-204ENST00000613235 858 ntBASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 AC068418.2-201ENST00000577309 3703 ntBASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 C8orf49-201ENST00000525043 1968 ntBASIC11.45□□□□□ -0.58
MRPL55Q7Z7F7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms