Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 AL450487.1-201ENST00000426799 995 ntBASIC17.04■□□□□ 0.32
RNF44Q7L0R7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 AC011467.2-201ENST00000598425 242 ntBASIC17.04■□□□□ 0.32
RNF44Q7L0R7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF44Q7L0R7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.03■□□□□ 0.32
RNF44Q7L0R7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 KRT18P31-201ENST00000506277 1292 ntBASIC17.03■□□□□ 0.32
RNF44Q7L0R7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 AL732292.2-201ENST00000609649 430 ntBASIC17.03■□□□□ 0.32
RNF44Q7L0R7 AC116407.2-201ENST00000613639 860 ntBASIC17.03■□□□□ 0.32
RNF44Q7L0R7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.03■□□□□ 0.32
RNF44Q7L0R7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF44Q7L0R7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 CROCCP1-201ENST00000426910 5675 ntBASIC17.02■□□□□ 0.32
RNF44Q7L0R7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 AC007967.3-201ENST00000434308 558 ntBASIC17.02■□□□□ 0.32
RNF44Q7L0R7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 KRT16P4-201ENST00000453883 522 ntBASIC17.02■□□□□ 0.32
RNF44Q7L0R7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.02■□□□□ 0.32
RNF44Q7L0R7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF44Q7L0R7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF44Q7L0R7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF44Q7L0R7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
RNF44Q7L0R7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RNF44Q7L0R7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.02■□□□□ 0.31
RNF44Q7L0R7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms