Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 FLJ13224-201ENST00000313737 1514 ntBASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 TSPY5P-201ENST00000426936 936 ntBASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 COX11P1-201ENST00000489116 835 ntBASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXR1Q6PIV2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 AC091390.4-202ENST00000476426 537 ntBASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.55■□□□□ 0.56
FOXR1Q6PIV2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 AL031133.1-201ENST00000406807 723 ntBASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 AC007663.1-201ENST00000438948 1240 ntBASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 KRT18P56-201ENST00000507275 550 ntBASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 AC093458.2-201ENST00000623150 629 ntBASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXR1Q6PIV2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXR1Q6PIV2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms