Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC178Q5BJE1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC178Q5BJE1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC178Q5BJE1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC178Q5BJE1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 AC007613.1-201ENST00000572811 2597 ntBASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 SAPCD2P3-201ENST00000455031 850 ntBASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 RN7SL510P-201ENST00000581311 263 ntBASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC178Q5BJE1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 AC106795.1-205ENST00000512851 1056 ntBASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCDC178Q5BJE1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 AC002558.1-201ENST00000488906 803 ntBASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC178Q5BJE1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC178Q5BJE1 AP005117.1-201ENST00000584346 1413 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms